Table 2. Presence and absence of AMR genes in the Bifidobacterium longum genomes from 4 AMR gene analysis programs

rgi staramr ABRicate AMR FinderPlus
Aminoglycoside O-phosphotransferase (APH(3')) O O O O
Tetracycline resistance ribosomal protection protein O O O O
Erm 23S ribosomal RNA methyltransferase O O O O
Aminoglycoside nucleotidyltransferase (ANT(6)) O X O O
Streptothricin acetyltransferase (SAT4) O X O O
Rifamycin-resistant beta-subunit of RNA polymerase (rpoB) O X X X
Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin O X X X
Antibiotic inactivation AAC(3) O X X X
Antibiotic inactivation MOX beta-lactamase O X X X
Antibiotic-resistant rpsL O X X X